Fast protein structure searching using structure graph embeddings
ICLR-2023 SaProt:Protein Language Modeling with Structure-aware Vocabulary
Nature Biotechnology-2023 Fast and accurate protein structure search with FoldseekFast and accurate protein structure search with Foldseek
ICML-2021 E(n) Equivariant Graph Neural Networks
ACS Synthetic Biology-2019 Machine Learning Applied to Predicting Microorganism Growth Temperatures and Enzyme Catalytic Optima
JCIM-2024 TM-search:An Efficient and Effective Tool for Protein Structure Database Search
Learning sequence, structure, and function representations of proteins with language models
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