Nature Biotechnology-2024 Multistate and functional protein design using RoseTTAFold sequence space diffusion

Oct 7 PaperNote BI Comments Word Count: 6.3k(words) Read Count: 22(minutes)

ICLR-2020 DivideMix：Learning with Noisy Labels as Semi-supervised Learning

Aug 23 PaperNote BI Comments Word Count: 1.8k(words) Read Count: 6(minutes)

Evaluating the representational power of pre-trained DNA language models for regulatory genomics

Jul 28 PaperNote BI Comments Word Count: 1.2k(words) Read Count: 4(minutes)

Feature Reuse and Scaling：Understanding Transfer Learning with Protein Language Models

Jul 15 PaperNote BI Comments Word Count: 773(words) Read Count: 2(minutes)

Simulating 500 million years of evolution with a language model

Jul 1 PaperNote BI Comments Word Count: 2.2k(words) Read Count: 8(minutes)

Nature Communications-2024 PLMSearch：Protein language model powers accurate and fast sequence search for remote homology

Jun 25 PaperNote BI Comments Word Count: 1.1k(words) Read Count: 4(minutes)

eLife-2024 Sensitive remote homology search by local alignment of small positional embeddings from protein language models

Jun 13 PaperNote BI Comments Word Count: 659(words) Read Count: 2(minutes)

Bioinformatics-2024 Embedding-based alignment：combining protein language models with dynamic programming alignment to detect structural similarities in the twilight-zone

May 29 PaperNote BI Comments Word Count: 641(words) Read Count: 2(minutes)

Nature Biotechnology-2024 Protein remote homology detection and structural alignment using deep learning

Apr 30 PaperNote BI Comments Word Count: 2.3k(words) Read Count: 8(minutes)

Fast protein structure searching using structure graph embeddings

Apr 27 PaperNote BI Comments Word Count: 826(words) Read Count: 3(minutes)