ACS Synthetic Biology-2019 Machine Learning Applied to Predicting Microorganism Growth Temperatures and Enzyme Catalytic Optima

Feb 3 PaperNote BI Comments Word Count: 816(words) Read Count: 3(minutes)

JCIM-2024 TM-search：An Efficient and Effective Tool for Protein Structure Database Search

Jan 31 PaperNote BI Comments Word Count: 592(words) Read Count: 2(minutes)

Learning sequence, structure, and function representations of proteins with language models

Jan 2 PaperNote BI Comments Word Count: 1.2k(words) Read Count: 4(minutes)

A joint embedding of protein sequence and structure enables robust variant effect predictions

Dec 31 PaperNote BI Comments Word Count: 1.2k(words) Read Count: 4(minutes)

NeurIPS-2023 ProteinGym：Large-Scale Benchmarks for Protein Design and Fitness Prediction

Dec 30 PaperNote BI Comments Word Count: 360(words) Read Count: 1(minutes)

ICML-2022 Perceiver IO：A General Architecture for Structured Inputs & Outputs

Nov 26 PaperNote CL, CV Comments Word Count: 1.8k(words) Read Count: 6(minutes)

ICML-2021 Perceiver：General Perception with Iterative Attention

Nov 19 PaperNote CV Comments Word Count: 556(words) Read Count: 2(minutes)

ICLRw-2023 Enhancing Protein Language Models with Structure-based Encoder and Pre-training

Nov 19 PaperNote BI Comments Word Count: 376(words) Read Count: 1(minutes)

Bioinformatics Advances-2021 Light attention predicts protein location from the language of life

Nov 19 PaperNote BI Comments Word Count: 319(words) Read Count: 1(minutes)

ICLRw-2022 Convolutions are competitive with transformers for protein sequence pretraining

Nov 19 PaperNote BI Comments Word Count: 252(words) Read Count: 1(minutes)